regvelo.datasets.murine_nc

regvelo.datasets.murine_nc(data_type='preprocessed')

Load mouse neural crest single-cell RNA-seq dataset (subset of Qiu et al.).

The gene regulatory network (GRN) is saved in adata.uns[‘skeleton’], which is learned via pySCENIC.

Parameters:

data_type (Literal['preprocessed', 'normalized', 'velocyto']) –

Data version to load. Options are:

• ”preprocessed” (default),

• ”normalized”,

• ”velocyto”.

Return type:

AnnData

Returns:

: Annotated data object.