PlottingΒΆ

plotting.commitment_score(adata[, lineage_key])

Compute and plot cell fate commitment scores based on fate probabilities.

plotting.cellfate_perturbation(adata, df[, ...])

Plot depletion likelihood or score for transcription factors across terminal states.

plotting.simulated_visit_diff(adata, ...[, ...])

Assign and visualize smoothed absolute differences in visit counts between control and perturbation simulations.

plotting.regulatory_network(motif[, figsize])

Visualize a gene regulatory network (GRN) from a DataFrame.